Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03210Hypothetical protein. (114 aa)    
Predicted Functional Partners:
CSBG_03211
Hypothetical protein.
 
     0.957
CSBG_02474
Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.835
CSBG_00175
Hypothetical protein.
  
 
 0.736
CSBG_00332
Hypothetical protein.
  
 
 0.736
CSBG_00377
Sigma-70 family RNA polymerase sigma factor.
  
 
 0.736
CSBG_01977
FliA/WhiG family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
 
 0.736
CSBG_01997
Flagellar motor switch protein FliG.
   
    0.736
CSBG_02001
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.736
CSBG_02012
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
   
    0.736
CSBG_02125
Iron-only hydrogenase maturation rSAM protein HydG.
   
    0.736
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
Server load: low (14%) [HD]