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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03230DNA repair protein RadC; Belongs to the UPF0758 family. (156 aa)    
Predicted Functional Partners:
CSBG_02807
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
  
 0.693
CSBG_02845
comF family protein.
 
    0.660
CSBG_02804
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.655
CSBG_02053
Diguanylate cyclase (GGDEF) domain-containing protein.
  
    0.558
CSBG_02689
RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
    0.556
CSBG_01779
DNA protecting protein DprA.
  
  
 0.486
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
     
 0.468
CSBG_03231
Hypothetical protein.
       0.463
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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