STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03340Hypothetical protein. (480 aa)    
Predicted Functional Partners:
CSBG_03339
Hypothetical protein.
 
 0.972
CSBG_03341
Hypothetical protein.
 
     0.857
CSBG_02970
PAS domain S-box protein.
 
 
 0.805
CSBG_00350
Hypothetical protein.
 
 
 0.788
CSBG_03342
Hypothetical protein.
 
   
 0.783
CSBG_03202
Hypothetical protein.
 
 0.764
CSBG_01447
Hypothetical protein.
  
 
  0.729
CSBG_02564
Hypothetical protein.
 
 0.723
CSBG_00820
Hypothetical protein.
 
 0.716
CSBG_01420
Hypothetical protein.
 
 0.712
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.