STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03348Hypothetical protein. (248 aa)    
Predicted Functional Partners:
CSBG_01467
Hypothetical protein.
  
     0.745
CSBG_00169
Hypothetical protein.
  
     0.708
CSBG_00612
Hypothetical protein.
  
     0.700
CSBG_02542
Hypothetical protein.
  
     0.691
CSBG_01060
Phage minor structural protein.
  
     0.684
CSBG_00181
Hypothetical protein.
  
     0.672
CSBG_02568
Hypothetical protein.
  
    0.651
CSBG_03196
Hypothetical protein.
  
     0.650
CSBG_01379
Hypothetical protein.
  
     0.637
CSBG_00773
Hypothetical protein.
  
     0.628
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.