Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03352Hypothetical protein; Belongs to the globin family. (145 aa)    
Predicted Functional Partners:
CSBG_02200
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
  
  
 0.980
CSBG_00359
Hypothetical protein.
  
 
 0.922
CSBG_02969
Hypothetical protein.
  
 
 0.922
CSBG_00922
Hydrid cluster protein-associated redox disulfide domain.
  
  
 0.891
CSBG_03391
Hypothetical protein.
  
  
 0.891
CSBG_03138
Hypothetical protein.
  
  
 0.886
CSBG_00350
Hypothetical protein.
  
 
 0.873
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.853
hcp-2
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.853
CSBG_00536
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.834
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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