STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03365Hypothetical protein. (492 aa)    
Predicted Functional Partners:
CSBG_00693
Hypothetical protein.
  
 
 0.892
CSBG_03258
Hypothetical protein.
  
 
 0.892
CSBG_00694
HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.844
CSBG_03256
HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.844
CSBG_00736
Hypothetical protein.
  
  
 0.545
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]
    
 
 0.518
CSBG_01283
Hypothetical protein.
  
    0.513
CSBG_03364
Hypothetical protein.
       0.513
CSBG_02008
Hypothetical protein.
    
   0.495
CSBG_01452
Hypothetical protein.
 
  
 0.454
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.