Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSBG_03389Hypothetical protein. (411 aa)    
Predicted Functional Partners:
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.900
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.900
CSBG_03388
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.827
CSBG_02040
Hypothetical protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
      0.733
CSBG_03387
Putative phosphoserine aminotransferase.
 
    0.682
CSBG_00932
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
  
  0.583
CSBG_02807
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
    
  0.539
CSBG_02544
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
  0.527
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.524
CSBG_01495
Glutamine synthetase.
     
  0.507
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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