Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03399Carbohydrate ABC transporter substrate-binding protein. (450 aa)    
Predicted Functional Partners:
CSBG_03396
Hypothetical protein.
 
 0.998
CSBG_03395
Hypothetical protein.
 
 0.991
CSBG_02281
Hypothetical protein; Belongs to the ABC transporter superfamily.
  
 0.932
CSBG_03219
Hypothetical protein; Belongs to the ABC transporter superfamily.
  
 0.932
CSBG_00415
Hypothetical protein.
  
 0.904
CSBG_03397
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase.
 
     0.892
CSBG_02748
Hypothetical protein.
   
 
 0.876
CSBG_00340
Hypothetical protein.
  
 0.856
CSBG_00450
Hypothetical protein.
  
 0.856
CSBG_00660
Hypothetical protein.
  
 0.856
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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