STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03482Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (362 aa)    
Predicted Functional Partners:
CSBG_02143
Hypothetical protein.
 
 
 0.990
CSBG_03484
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
CSBG_03483
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.974
CSBG_02881
Hypothetical protein.
 
 
 0.961
CSBG_03456
Hypothetical protein.
 
 
 0.958
CSBG_02144
Hypothetical protein.
 
 
 0.956
CSBG_02882
Hypothetical protein.
 
 
 0.922
CSBG_00651
Hypothetical protein.
 
 
 0.919
CSBG_02886
Hypothetical protein.
 
 
 0.914
rbsA
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
  0.627
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.