Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03483Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (301 aa)    
Predicted Functional Partners:
CSBG_02143
Hypothetical protein.
 
 
 0.990
CSBG_03482
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.974
CSBG_02880
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.964
CSBG_02144
Hypothetical protein.
 
 
 0.961
CSBG_02881
Hypothetical protein.
 
 
 0.959
CSBG_02882
Hypothetical protein.
 
 
 0.931
CSBG_00651
Hypothetical protein.
 
 
 0.927
CSBG_02886
Hypothetical protein.
 
 
 0.918
rbsA
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
 0.588
CSBG_02635
Hypothetical protein.
 
  
 0.571
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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