STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_03541Hypothetical protein. (639 aa)    
Predicted Functional Partners:
CSBG_00132
Hypothetical protein.
 
 
 0.999
CSBG_00459
Hypothetical protein.
 
 
 0.990
CSBG_03199
PTS system, Fru family, IIC component.
  
 
 0.985
CSBG_00749
PTS system, Fru family, IIC component.
 
 
 0.968
CSBG_00130
PTS system, mannitol-specific IIC component.
 
 
 0.963
mtlD
Hypothetical protein.
 
 
 0.963
CSBG_02225
Hypothetical protein.
 
 
 0.929
CSBG_02360
Hypothetical protein.
 
 
 0.919
CSBG_01743
HPr family phosphocarrier.
 
 0.905
CSBG_00731
PTS system, glucose-like IIB component.
 
 0.893
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.