STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO85814.1MATE efflux family protein. (443 aa)    
Predicted Functional Partners:
EHO85815.1
Hypothetical protein.
 
  
 0.818
EHO84851.1
Hypothetical protein.
    
  0.683
EHO83872.1
Ribonuclease III.
   
 
  0.563
EHO82205.1
asparagine-tRNA ligase.
    
  0.549
EHO84238.1
Hypothetical protein.
   
  
 0.539
EHO81120.1
Glyceraldehyde-3-phosphate dehydrogenase, type I.
  
  
 0.503
EHO81711.1
Ribosomal protein L18.
     
  0.437
EHO83757.1
MATE efflux family protein.
 
     0.431
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.