Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO85626.1Hypothetical protein. (280 aa)    
Predicted Functional Partners:
EHO85624.1
Hypothetical protein.
 
  
 0.949
EHO85627.1
Hypothetical protein.
 
  
 0.834
EHO81390.1
PTS system, fructose subfamily, IIA component.
 
 
  0.832
EHO85628.1
Hypothetical protein.
 
    0.816
EHO83378.1
PTS system, Fru family, IIC component.
  
 
  0.808
EHO80873.1
Chorismate mutase.
    
 0.803
EHO85629.1
Hypothetical protein.
 
    0.800
EHO85630.1
Hypothetical protein.
 
    0.792
EHO85625.1
HAD hydrolase, family IA.
       0.775
EHO81215.1
Hypothetical protein.
 
  
 0.752
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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