Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO85636.1Hypothetical protein. (456 aa)    
Predicted Functional Partners:
EHO84745.1
Amino acid adenylation domain-containing protein.
  
 0.958
EHO86085.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.956
EHO85043.1
methionyl-tRNA formyltransferase.
 
   
 0.955
EHO85997.1
Hypothetical protein.
  
 
 0.937
EHO85788.1
Fumarate hydratase, class II.
  
 0.928
EHO86000.1
L-lactate dehydrogenase.
  
 0.922
EHO86418.1
Hypothetical protein.
  
 0.917
EHO82474.1
Hypothetical protein.
 
 0.914
EHO81448.1
Triose-phosphate isomerase.
  
 0.914
EHO83834.1
Hypothetical protein.
  
 0.913
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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