STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO85641.1Hypothetical protein. (774 aa)    
Predicted Functional Partners:
EHO85413.1
DNA polymerase I.
  
 0.972
EHO81593.1
DNA polymerase III, beta subunit.
    
 0.944
EHO81702.1
DNA-directed RNA polymerase, alpha subunit.
   
 0.922
EHO80343.1
DNA-directed RNA polymerase, beta subunit.
   
 0.912
EHO85393.1
Exonuclease SbcCD, D subunit.
  
 0.853
EHO85394.1
Exonuclease SbcC.
   
 0.852
EHO81573.1
DNA mismatch repair protein MutL.
   
 0.825
EHO81425.1
Replicative DNA helicase.
     
 0.809
EHO83395.1
Hypothetical protein.
   
 0.802
EHO80620.1
Hypothetical protein.
   
 0.802
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.