STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO85642.1RluA family pseudouridine synthase. (314 aa)    
Predicted Functional Partners:
EHO85031.1
tRNA (guanine-N(7)-)-methyltransferase.
  
 
 0.752
EHO84561.1
Ribosomal protein L21.
 
   0.720
EHO84804.1
Iojap-like ribosome-associated protein.
  
 
 0.700
EHO81727.1
50S ribosomal protein L3.
   
 
 0.687
EHO81701.1
Ribosomal protein L17.
  
 
 0.686
EHO81709.1
50S ribosomal protein L15.
  
 
 0.684
EHO81774.1
Ribosomal protein L13.
  
 
 0.679
EHO84558.1
Obg family GTPase CgtA.
 
 
 0.674
EHO80338.1
Ribosomal protein L11.
   
 
 0.665
EHO81124.1
RNA methyltransferase, TrmH family, group 3.
 
 
 0.645
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.