Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO85643.1Hypothetical protein. (424 aa)    
Predicted Functional Partners:
EHO85642.1
RluA family pseudouridine synthase.
 
    0.577
EHO86085.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.526
EHO86093.1
Hypothetical protein.
 
   
 0.490
EHO86088.1
Calcium-translocating P-type ATPase, PMCA-type.
  
 
 0.475
EHO84867.1
HAD ATPase, P-type, family IC.
  
 
 0.475
EHO83876.1
Calcium-translocating P-type ATPase, SERCA-type.
  
 
 0.475
EHO85644.1
Hypothetical protein.
       0.440
EHO85759.1
Hypothetical protein.
     
 0.429
EHO83201.1
Hypothetical protein.
 
    0.405
EHO85646.1
Hypothetical protein.
     
 0.403
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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