Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO85379.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
EHO85380.1
Ferrous iron transporter B.
 
  
 0.917
EHO86085.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.717
EHO85457.1
Ferrous iron transporter B.
 
  
 0.655
EHO81097.1
Prolipoprotein diacylglyceryl transferase.
  
  
 0.631
EHO85456.1
Hypothetical protein.
  
  
 0.603
EHO83855.1
Ferrous iron transporter B.
  
  
 0.603
EHO83856.1
Hypothetical protein.
  
  
 0.603
EHO82548.1
Ferrous iron transporter B.
  
  
 0.603
EHO82549.1
Hypothetical protein.
  
  
 0.603
EHO85378.1
Hypothetical protein.
     
 0.561
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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