STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO85476.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
EHO85475.1
Hypothetical protein.
 
     0.935
EHO81132.1
Preprotein translocase, SecG subunit.
 
  
 0.704
EHO84975.1
Hypothetical protein.
  
     0.698
EHO85474.1
Hypothetical protein.
  
 
 0.683
EHO81597.1
YidC/Oxa1 family membrane protein insertase.
 
  
 0.681
EHO84835.1
Hypothetical protein.
  
     0.675
EHO86085.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.674
EHO82562.1
Hypothetical protein.
  
     0.671
EHO83879.1
Cell division protein FtsA.
 
 
 0.657
EHO80678.1
Hypothetical protein.
 
  
 0.656
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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