STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO84837.1Thiamine biosynthesis/tRNA modification protein ThiI. (405 aa)    
Predicted Functional Partners:
EHO84836.1
Hypothetical protein.
 
 0.994
EHO83892.1
Ribosomal RNA small subunit methyltransferase B.
  
  
 0.940
EHO84835.1
Hypothetical protein.
       0.796
EHO83937.1
Hypothetical protein.
    
 0.786
EHO84386.1
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
 
 
 0.782
EHO81571.1
Hypothetical protein.
     
 0.743
EHO83367.1
NOL1/NOP2/sun family putative RNA methylase.
  
    0.644
EHO84839.1
single-stranded-DNA-specific exonuclease RecJ.
  
    0.640
EHO85480.1
NifU family SUF system FeS assembly protein.
  
  
 0.631
EHO84838.1
Hypothetical protein.
       0.631
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.