STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO84890.1Pseudouridine synthase. (245 aa)    
Predicted Functional Partners:
EHO84945.1
Ribosome-associated GTPase EngA.
 
  
 0.879
EHO84944.1
Cytidylate kinase.
 
  
 0.865
EHO84557.1
Exodeoxyribonuclease III (xth).
  
    0.746
EHO84885.1
Segregation and condensation protein B.
 
  
 0.734
EHO84891.1
RsmE family RNA methyltransferase.
  
  
 0.639
EHO84889.1
Hypothetical protein.
       0.631
EHO84561.1
Ribosomal protein L21.
 
 
   0.615
EHO84886.1
Hypothetical protein.
      0.596
EHO84893.1
MiaB-like tRNA modifying enzyme.
  
  
 0.595
EHO83784.1
Ribosomal protein L20.
  
 
 0.585
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.