STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO84914.1Cytidine deaminase. (133 aa)    
Predicted Functional Partners:
EHO85011.1
Pyrimidine-nucleoside phosphorylase.
 
 
 0.965
EHO84912.1
Metalloprotein, YbeY/UPF0054family.
 
  
 0.951
EHO83775.1
Hypothetical protein.
  
 
 0.925
EHO80471.1
Hypothetical protein.
    
 0.909
EHO84376.1
Uridine kinase.
    
 0.906
EHO84916.1
DNA repair protein RecO.
  
  
 0.867
EHO84915.1
GTP-binding protein Era.
  
  
 0.854
EHO83883.1
Hypothetical protein.
    
 0.837
EHO86904.1
Hypothetical protein.
   
 0.835
EHO85324.1
Hypothetical protein.
    
 0.808
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.