STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO84949.1Stage IV sporulation protein A. (492 aa)    
Predicted Functional Partners:
EHO80601.1
Stage II sporulation protein D.
  
  
 0.897
EHO80602.1
Hypothetical protein.
  
  
 0.848
EHO85488.1
Anti-sigma F factor.
  
  
 0.833
EHO80607.1
Hypothetical protein.
  
   
 0.824
EHO85487.1
Anti-sigma F factor antagonist.
  
   
 0.819
EHO85045.1
Stage II sporulation protein P.
 
   
 0.819
EHO84256.1
RNA polymerase sigma-G factor.
 
  
 0.817
EHO84879.1
Stage V sporulation protein AC.
  
   
 0.803
EHO84880.1
Stage V sporulation protein AD.
  
   
 0.803
EHO85046.1
GPR endopeptidase.
  
   
 0.803
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.