Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO84950.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
EHO81425.1
Replicative DNA helicase.
  
 
 0.923
EHO84918.1
DNA primase.
    
 0.915
EHO83894.1
Primosomal protein N'.
    
  0.901
EHO81594.1
Chromosomal replication initiator protein DnaA.
    
 0.868
EHO85069.1
50S ribosomal protein L19.
  
 
 0.841
EHO83234.1
Hypothetical protein.
     
  0.788
EHO81601.1
Transcription-repair coupling factor.
    
 0.785
EHO83166.1
Phosphoheptose isomerase.
     
 0.778
EHO81322.1
Hypothetical protein.
    
  0.775
EHO85775.1
Hypothetical protein.
    
 0.752
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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