STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO84558.1Obg family GTPase CgtA. (429 aa)    
Predicted Functional Partners:
EHO84559.1
50S ribosomal protein L27.
 
 0.977
EHO83784.1
Ribosomal protein L20.
 
 
 0.955
EHO84561.1
Ribosomal protein L21.
 
 
 0.950
EHO84804.1
Iojap-like ribosome-associated protein.
  
 
 0.883
EHO80339.1
Ribosomal protein L1.
 
 
 0.882
EHO80338.1
Ribosomal protein L11.
 
 
 0.879
EHO81774.1
Ribosomal protein L13.
 
 
 0.867
EHO85069.1
50S ribosomal protein L19.
 
 
 0.863
EHO84276.1
RluA family pseudouridine synthase.
 
 
 0.862
EHO81424.1
Ribosomal protein L9.
  
 
 0.857
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.