STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83771.1Desulfoferrodoxin. (126 aa)    
Predicted Functional Partners:
EHO82582.1
Hydrogenase, Fe-only.
  
  
 0.813
EHO86006.1
Hypothetical protein.
  
  
 0.772
EHO86065.1
Hypothetical protein.
  
 0.702
EHO85997.1
Hypothetical protein.
 
  
 0.698
EHO85996.1
Hypothetical protein.
 
  
 0.666
EHO82553.1
Flavodoxin.
  
  
 0.623
EHO83918.1
Hypothetical protein.
 
  
 0.567
EHO83770.1
Hypothetical protein.
       0.503
EHO80699.1
Hypothetical protein.
 
  
 0.502
EHO83772.1
RluA family pseudouridine synthase.
       0.492
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.