Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83801.1Hypothetical protein. (337 aa)    
Predicted Functional Partners:
EHO83799.1
Hypothetical protein.
 
 0.997
EHO83800.1
Hypothetical protein.
 
 0.996
EHO81874.1
Hypothetical protein.
     
 0.900
EHO85614.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
    
 0.834
EHO84899.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
    
 0.834
EHO83802.1
Hypothetical protein.
 
   
 0.809
EHO86493.1
Hypothetical protein.
    
 0.808
EHO82340.1
Hypothetical protein.
    
 0.781
EHO81778.1
Hypothetical protein.
    
 0.758
EHO81779.1
Hypothetical protein.
    
 0.758
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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