Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83869.1Glutamate 5-kinase. (266 aa)    
Predicted Functional Partners:
EHO83870.1
Glutamate-5-semialdehyde dehydrogenase.
 
 0.999
EHO84206.1
Acetylornithine and succinylornithine aminotransferase.
   
 0.910
EHO85636.1
Hypothetical protein.
  
 
 0.825
EHO81310.1
Pyrroline-5-carboxylate reductase.
 
 
 0.816
EHO83247.1
Hypothetical protein.
    
 0.664
EHO84118.1
ATP-dependent protease La.
  
 
 0.653
EHO85378.1
Hypothetical protein.
     
 0.649
EHO80587.1
ATP synthase F1, delta subunit.
    
 0.629
EHO80427.1
Hypothetical protein.
  
 
 0.591
EHO84842.1
Hypothetical protein.
    
  0.543
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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