STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83892.1Ribosomal RNA small subunit methyltransferase B. (415 aa)    
Predicted Functional Partners:
EHO85043.1
methionyl-tRNA formyltransferase.
  
  
 0.982
EHO85066.1
Ribosome biogenesis GTP-binding protein YlqF.
 
 0.939
EHO80340.1
Hypothetical protein.
  
 0.933
EHO81725.1
Hypothetical protein.
 
 0.930
EHO84801.1
Ribosome biogenesis GTPase YqeH.
  
 0.928
EHO83889.1
23S rRNA methyltransferase.
  
  
 0.928
EHO84849.1
Transcription termination factor NusA.
  
 
 0.922
EHO80343.1
DNA-directed RNA polymerase, beta subunit.
  
 
 0.917
EHO84979.1
tRNA pseudouridine synthase B.
 
 
 0.911
EHO81722.1
50S ribosomal protein L22.
   
 0.911
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.