STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83950.1proline-tRNA ligase. (563 aa)    
Predicted Functional Partners:
EHO80465.1
methionine-tRNA ligase.
  
 0.995
EHO82205.1
asparagine-tRNA ligase.
  
 0.993
EHO85434.1
isoleucine-tRNA ligase.
   
 0.989
EHO80459.1
arginine-tRNA ligase.
 
 0.988
EHO82576.1
glutamate-tRNA ligase.
  
 0.984
EHO84991.1
leucine-tRNA ligase.
  
 0.982
EHO80616.1
lysine-tRNA ligase.
  
 0.982
EHO85459.1
phenylalanine-tRNA ligase, beta subunit.
  
 0.953
EHO85052.1
Di-trans,poly-cis-decaprenylcistransferase.
  
  
 0.854
EHO81774.1
Ribosomal protein L13.
  
 0.844
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.