Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO83383.1Hypothetical protein. (664 aa)    
Predicted Functional Partners:
EHO83378.1
PTS system, Fru family, IIC component.
 
 
 0.990
EHO81390.1
PTS system, fructose subfamily, IIA component.
  
 
 0.982
EHO82202.1
Hypothetical protein.
 
 
 0.972
EHO81400.1
PTS system, Fru family, IIB component.
 
 
 0.962
EHO81401.1
PTS system, Fru family, IIC component.
 
 
 0.961
EHO84113.1
PTS system, Fru family, IIC component.
  
 
 0.956
EHO81392.1
PTS system, Fru family, IIC component.
  
 
 0.956
EHO81393.1
Hypothetical protein.
 
 
 0.954
EHO81402.1
Hypothetical protein.
 
 
 0.954
EHO84782.1
PTS system, glucose subfamily, IIA component.
  
 0.931
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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