Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO82522.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
EHO83773.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.857
EHO81599.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.848
EHO81754.1
GTP cyclohydrolase II.
    
 0.792
EHO81582.1
DNA polymerase III, subunit gamma and tau.
   
  0.748
EHO80944.1
Hypothetical protein.
   
  0.748
EHO81742.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.727
EHO84372.1
DNA polymerase III, delta subunit.
    
  0.680
EHO81593.1
DNA polymerase III, beta subunit.
     
  0.673
EHO86104.1
acetyl-CoA carboxylase, carboxyl transferase, beta subunit.
   
  0.648
EHO81418.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.620
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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