STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO82546.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
EHO81702.1
DNA-directed RNA polymerase, alpha subunit.
   
 
 0.822
EHO82547.1
Hypothetical protein.
 
   
 0.793
EHO82545.1
Hypothetical protein.
 
     0.772
EHO84919.1
RNA polymerase sigma factor RpoD.
  
 
 0.758
EHO82582.1
Hydrogenase, Fe-only.
  
  
 0.735
EHO82544.1
Heavy metal translocating P-type ATPase.
 
   
 0.722
EHO80343.1
DNA-directed RNA polymerase, beta subunit.
   
 
 0.673
EHO80344.1
DNA-directed RNA polymerase, beta' subunit.
   
   0.665
EHO82550.1
Hypothetical protein.
  
  
 0.633
EHO81637.1
Phosphoribosylformylglycinamidine synthase.
    
 0.622
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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