Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO82208.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
EHO83925.1
NAD+ synthetase.
  
 
 0.845
EHO81599.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.825
EHO86085.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.821
EHO86418.1
Hypothetical protein.
    
 0.816
EHO84815.1
Competence/damage-inducible protein CinA domain.
    
 0.816
EHO86025.1
Ribonucleoside-diphosphate reductase, alpha subunit.
    
  0.803
EHO81754.1
GTP cyclohydrolase II.
     
 0.800
EHO83883.1
Hypothetical protein.
    
  0.773
EHO84841.1
RelA/SpoT family protein.
  
 
 0.715
EHO84956.1
CTP synthase.
    
  0.712
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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