STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO81581.1YbaB/EbfC family DNA-binding protein. (102 aa)    
Predicted Functional Partners:
EHO81580.1
Recombination protein RecR.
  
  
 0.986
EHO81582.1
DNA polymerase III, subunit gamma and tau.
  
  
 0.918
EHO81325.1
Preprotein translocase, SecA subunit.
  
 
 0.771
EHO84543.1
Signal recognition particle protein.
 
  
  0.763
EHO81708.1
Preprotein translocase, SecY subunit.
  
 
  0.735
EHO81597.1
YidC/Oxa1 family membrane protein insertase.
  
 
  0.731
EHO84566.1
Signal recognition particle-docking protein FtsY.
    
 0.725
EHO81127.1
Preprotein translocase, SecE subunit.
   
 
  0.725
EHO81132.1
Preprotein translocase, SecG subunit.
    
  0.718
EHO80944.1
Hypothetical protein.
  
  
 0.640
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.