STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO81631.1spx/MgsR family transcriptional regulator. (120 aa)    
Predicted Functional Partners:
EHO81702.1
DNA-directed RNA polymerase, alpha subunit.
    
   0.675
EHO81630.1
Hypothetical protein.
       0.667
EHO80445.1
Hypothetical protein.
  
 
  0.606
EHO86033.1
Hypothetical protein.
     
 0.586
EHO81632.1
Hypothetical protein.
       0.584
EHO86419.1
Hypothetical protein.
 
  
 0.582
EHO80578.1
Hypothetical protein.
     
  0.558
EHO85378.1
Hypothetical protein.
     
  0.526
EHO81637.1
Phosphoribosylformylglycinamidine synthase.
    
  0.503
EHO85770.1
spx/MgsR family transcriptional regulator.
  
   
 0.499
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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