STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO81124.1RNA methyltransferase, TrmH family, group 3. (240 aa)    
Predicted Functional Partners:
EHO81123.1
Hypothetical protein.
  
  
 0.944
EHO81122.1
cysteine-tRNA ligase.
  
 
 0.941
EHO80338.1
Ribosomal protein L11.
  
   0.900
EHO83772.1
RluA family pseudouridine synthase.
 
 
 0.773
EHO81774.1
Ribosomal protein L13.
 
 
 0.771
EHO84801.1
Ribosome biogenesis GTPase YqeH.
  
 
 0.761
EHO81727.1
50S ribosomal protein L3.
 
 
 
 0.743
EHO81126.1
Ribosomal protein L33.
   
 
 0.741
EHO83784.1
Ribosomal protein L20.
 
 
 0.712
EHO85066.1
Ribosome biogenesis GTP-binding protein YlqF.
 
 
 0.707
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.