STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO81125.1Sigma-70 family RNA polymerase sigma factor. (198 aa)    
Predicted Functional Partners:
EHO80343.1
DNA-directed RNA polymerase, beta subunit.
    
 0.876
EHO80344.1
DNA-directed RNA polymerase, beta' subunit.
   
 0.875
EHO81702.1
DNA-directed RNA polymerase, alpha subunit.
    
 0.860
EHO81127.1
Preprotein translocase, SecE subunit.
 
   
 0.737
EHO81123.1
Hypothetical protein.
  
    0.650
EHO81128.1
Transcription termination/antitermination factor NusG.
     
 0.638
EHO84103.1
Hypothetical protein.
    
 
 0.630
EHO81126.1
Ribosomal protein L33.
       0.630
EHO81130.1
TIGR01457 family HAD hydrolase.
  
    0.603
EHO81122.1
cysteine-tRNA ligase.
  
  
 0.598
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.