STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO81133.1Ribonuclease R. (705 aa)    
Predicted Functional Partners:
EHO85033.1
Polyribonucleotide nucleotidyltransferase.
   
 
 0.867
EHO81738.1
30S ribosomal protein S7.
   
 
 0.837
EHO81421.1
30S ribosomal protein S18.
  
   0.833
EHO81718.1
30S ribosomal protein S17.
   
 
 0.832
EHO85034.1
30S ribosomal protein S15.
  
 
 0.824
EHO81704.1
30S ribosomal protein S13.
   
 
 0.822
EHO81703.1
30S ribosomal protein S11.
   
 
 0.821
EHO81739.1
30S ribosomal protein S12.
   
 
 0.820
EHO84834.1
Ribosomal protein S4.
  
 
 0.819
EHO81713.1
30S ribosomal protein S8.
   
 
 0.804
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.