Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO80928.1Phage tail tape measure protein, TP901 family, core region. (948 aa)    
Predicted Functional Partners:
EHO80929.1
Hypothetical protein.
  
    0.770
EHO80930.1
Hypothetical protein.
       0.763
EHO80918.1
SPP1 gp7 family phage putative head morphogenesis protein.
 
   
 0.719
EHO80931.1
Hypothetical protein.
       0.719
EHO80932.1
Hypothetical protein.
       0.688
EHO80917.1
SPP1 family phage portal protein.
 
    0.528
EHO80924.1
HK97 gp10 family phage protein.
     
 0.518
EHO80915.1
Hypothetical protein.
 
     0.502
EHO80920.1
Hypothetical protein.
 
     0.477
EHO80938.1
Toxin secretion/phage lysis holin.
 
    0.476
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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