Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO80930.1Hypothetical protein. (362 aa)    
Predicted Functional Partners:
EHO80931.1
Hypothetical protein.
 
  
 0.982
EHO80929.1
Hypothetical protein.
 
     0.953
EHO86460.1
Hypothetical protein.
  
    0.803
EHO80928.1
Phage tail tape measure protein, TP901 family, core region.
       0.763
EHO83366.1
Hypothetical protein.
  
  
 0.729
EHO80932.1
Hypothetical protein.
       0.717
EHO80915.1
Hypothetical protein.
  
    0.665
EHO86836.1
Hypothetical protein.
  
    0.577
EHO86090.1
Hypothetical protein.
  
     0.560
EHO80938.1
Toxin secretion/phage lysis holin.
 
     0.495
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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