STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO80449.1GTP-binding protein YchF. (367 aa)    
Predicted Functional Partners:
EHO80308.1
Peptide chain release factor 1.
 
 
 0.856
EHO81600.1
peptidyl-tRNA hydrolase.
 
  
 0.841
EHO81424.1
Ribosomal protein L9.
  
 
 0.838
EHO81774.1
Ribosomal protein L13.
  
 
 0.832
EHO81717.1
50S ribosomal protein L14.
   
 
 0.826
EHO85069.1
50S ribosomal protein L19.
  
 
 0.819
EHO81724.1
50S ribosomal protein L2.
   
 
 0.818
EHO85459.1
phenylalanine-tRNA ligase, beta subunit.
  
  
 0.813
EHO84561.1
Ribosomal protein L21.
  
 
 0.811
EHO81716.1
Ribosomal protein L24.
   
 
 0.807
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.