Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHO80342.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
EHO80341.1
Ribosomal protein L7/L12.
  
  
 0.814
EHO80340.1
Hypothetical protein.
 
  
 0.795
EHO83255.1
Hypothetical protein.
    
 0.737
EHO80339.1
Ribosomal protein L1.
  
  
 0.732
EHO84558.1
Obg family GTPase CgtA.
   
  
 0.712
EHO84745.1
Amino acid adenylation domain-containing protein.
    
 0.708
EHO80343.1
DNA-directed RNA polymerase, beta subunit.
  
    0.646
EHO84849.1
Transcription termination factor NusA.
  
    0.627
EHO85052.1
Di-trans,poly-cis-decaprenylcistransferase.
   
  
 0.611
EHO84250.1
rdgB/HAM1 family non-canonical purine NTP pyrophosphatase.
   
 
  0.604
Your Current Organism:
Eubacterium sp. 3131
NCBI taxonomy Id: 457402
Other names: E. sp. 3_1_31, Eubacterium sp. 3_1_31
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