STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnjHypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (569 aa)    
Predicted Functional Partners:
EHL65711.1
Hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
    0.817
EHL65310.1
Hypothetical protein.
  
    0.773
EHL65313.1
Hypothetical protein.
       0.691
EHL65314.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.691
uppP
Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.691
EHL65309.1
Cell division ATP-binding protein FtsE.
  
    0.667
EHL65308.1
Hypothetical protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.665
EHL65311.1
Hypothetical protein.
       0.665
EHL65312.1
Polysaccharide pyruvyl transferase CsaB.
       0.665
rny
Hypothetical protein; Endoribonuclease that initiates mRNA decay.
  
 
 0.665
Your Current Organism:
Synergistes sp. 31syn1
NCBI taxonomy Id: 457415
Other names: S. sp. 3_1_syn1, Synergistes sp. 3_1_syn1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.