Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHL64410.1 | EHL65404.1 | HMPREF1006_00695 | HMPREF1006_00417 | (2,3-dihydroxybenzoyl)adenylate synthase. | Hypothetical protein. | 0.835 |
EHL64410.1 | EHL66544.1 | HMPREF1006_00695 | HMPREF1006_01667 | (2,3-dihydroxybenzoyl)adenylate synthase. | Hypothetical protein. | 0.818 |
EHL64410.1 | aroK | HMPREF1006_00695 | HMPREF1006_01668 | (2,3-dihydroxybenzoyl)adenylate synthase. | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.860 |
EHL65403.1 | EHL65404.1 | HMPREF1006_00416 | HMPREF1006_00417 | Hypothetical protein. | Hypothetical protein. | 0.999 |
EHL65403.1 | EHL66544.1 | HMPREF1006_00416 | HMPREF1006_01667 | Hypothetical protein. | Hypothetical protein. | 0.914 |
EHL65403.1 | aroK | HMPREF1006_00416 | HMPREF1006_01668 | Hypothetical protein. | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.961 |
EHL65403.1 | trpA | HMPREF1006_00416 | HMPREF1006_00411 | Hypothetical protein. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.997 |
EHL65403.1 | trpB | HMPREF1006_00416 | HMPREF1006_00088 | Hypothetical protein. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.938 |
EHL65403.1 | trpB-2 | HMPREF1006_00416 | HMPREF1006_00412 | Hypothetical protein. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.989 |
EHL65403.1 | trpC | HMPREF1006_00416 | HMPREF1006_00414 | Hypothetical protein. | Hypothetical protein; Belongs to the TrpC family. | 0.999 |
EHL65403.1 | trpD | HMPREF1006_00416 | HMPREF1006_00415 | Hypothetical protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
EHL65403.1 | trpF | HMPREF1006_00416 | HMPREF1006_00413 | Hypothetical protein. | Hypothetical protein; Belongs to the TrpF family. | 0.997 |
EHL65404.1 | EHL64410.1 | HMPREF1006_00417 | HMPREF1006_00695 | Hypothetical protein. | (2,3-dihydroxybenzoyl)adenylate synthase. | 0.835 |
EHL65404.1 | EHL65403.1 | HMPREF1006_00417 | HMPREF1006_00416 | Hypothetical protein. | Hypothetical protein. | 0.999 |
EHL65404.1 | EHL66544.1 | HMPREF1006_00417 | HMPREF1006_01667 | Hypothetical protein. | Hypothetical protein. | 0.913 |
EHL65404.1 | aroK | HMPREF1006_00417 | HMPREF1006_01668 | Hypothetical protein. | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.959 |
EHL65404.1 | trpA | HMPREF1006_00417 | HMPREF1006_00411 | Hypothetical protein. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.995 |
EHL65404.1 | trpB | HMPREF1006_00417 | HMPREF1006_00088 | Hypothetical protein. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.911 |
EHL65404.1 | trpB-2 | HMPREF1006_00417 | HMPREF1006_00412 | Hypothetical protein. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.989 |
EHL65404.1 | trpC | HMPREF1006_00417 | HMPREF1006_00414 | Hypothetical protein. | Hypothetical protein; Belongs to the TrpC family. | 0.999 |
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