Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHL69272.1 | EHL69273.1 | HMPREF1006_01999 | HMPREF1006_02000 | Hypothetical protein. | MJ0936 family phosphodiesterase. | 0.577 |
EHL69272.1 | EHL69274.1 | HMPREF1006_01999 | HMPREF1006_02001 | Hypothetical protein. | Hypothetical protein. | 0.549 |
EHL69272.1 | EHL69275.1 | HMPREF1006_01999 | HMPREF1006_02002 | Hypothetical protein. | Hypothetical protein. | 0.586 |
EHL69272.1 | EHL69276.1 | HMPREF1006_01999 | HMPREF1006_02003 | Hypothetical protein. | Hypothetical protein. | 0.474 |
EHL69272.1 | EHL69277.1 | HMPREF1006_01999 | HMPREF1006_02004 | Hypothetical protein. | Hypothetical protein. | 0.474 |
EHL69272.1 | EHL69278.1 | HMPREF1006_01999 | HMPREF1006_02005 | Hypothetical protein. | Hypothetical protein. | 0.474 |
EHL69272.1 | EHL69279.1 | HMPREF1006_01999 | HMPREF1006_02006 | Hypothetical protein. | Hypothetical protein. | 0.405 |
EHL69272.1 | EHL69281.1 | HMPREF1006_01999 | HMPREF1006_02008 | Hypothetical protein. | rdgB/HAM1 family non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.403 |
EHL69272.1 | rph | HMPREF1006_01999 | HMPREF1006_02007 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.403 |
EHL69273.1 | EHL69272.1 | HMPREF1006_02000 | HMPREF1006_01999 | MJ0936 family phosphodiesterase. | Hypothetical protein. | 0.577 |
EHL69273.1 | EHL69274.1 | HMPREF1006_02000 | HMPREF1006_02001 | MJ0936 family phosphodiesterase. | Hypothetical protein. | 0.781 |
EHL69273.1 | EHL69275.1 | HMPREF1006_02000 | HMPREF1006_02002 | MJ0936 family phosphodiesterase. | Hypothetical protein. | 0.830 |
EHL69273.1 | EHL69276.1 | HMPREF1006_02000 | HMPREF1006_02003 | MJ0936 family phosphodiesterase. | Hypothetical protein. | 0.710 |
EHL69273.1 | EHL69277.1 | HMPREF1006_02000 | HMPREF1006_02004 | MJ0936 family phosphodiesterase. | Hypothetical protein. | 0.709 |
EHL69273.1 | EHL69278.1 | HMPREF1006_02000 | HMPREF1006_02005 | MJ0936 family phosphodiesterase. | Hypothetical protein. | 0.685 |
EHL69273.1 | EHL69279.1 | HMPREF1006_02000 | HMPREF1006_02006 | MJ0936 family phosphodiesterase. | Hypothetical protein. | 0.583 |
EHL69273.1 | EHL69281.1 | HMPREF1006_02000 | HMPREF1006_02008 | MJ0936 family phosphodiesterase. | rdgB/HAM1 family non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.943 |
EHL69273.1 | rph | HMPREF1006_02000 | HMPREF1006_02007 | MJ0936 family phosphodiesterase. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.606 |
EHL69274.1 | EHL69272.1 | HMPREF1006_02001 | HMPREF1006_01999 | Hypothetical protein. | Hypothetical protein. | 0.549 |
EHL69274.1 | EHL69273.1 | HMPREF1006_02001 | HMPREF1006_02000 | Hypothetical protein. | MJ0936 family phosphodiesterase. | 0.781 |
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