STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL70792.1DctP family TRAP transporter solute receptor. (323 aa)    
Predicted Functional Partners:
EHL70790.1
TRAP transporter, DctM subunit.
 
 
  0.920
EHL70791.1
Hypothetical protein.
 
 
  0.897
EHL69914.1
TRAP transporter, DctM subunit.
  
 
  0.813
EHL67283.1
Hypothetical protein.
  
 
  0.811
EHL70818.1
TRAP transporter, DctM subunit.
  
 
  0.811
EHL69137.1
TRAP transporter, DctM subunit.
  
 
  0.810
EHL70770.1
TRAP transporter, DctM subunit.
  
 
  0.810
EHL66895.1
TRAP transporter, DctM subunit.
  
 
  0.808
EHL67796.1
TRAP transporter, DctM subunit.
  
 
  0.805
EHL71367.1
TRAP transporter, DctM subunit.
  
 
  0.805
Your Current Organism:
Synergistes sp. 31syn1
NCBI taxonomy Id: 457415
Other names: S. sp. 3_1_syn1, Synergistes sp. 3_1_syn1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.