STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL66062.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
EHL68255.1
Hypothetical protein.
  
 
 0.971
EHL68256.1
Hypothetical protein.
  
 
 0.925
EHL66923.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
     
 0.872
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
     
 0.846
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.828
EHL69299.1
Hypothetical protein.
    
 0.779
EHL66064.1
Hypothetical protein.
    
  0.684
rpsZ
30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.635
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.626
EHL64426.1
Hypothetical protein.
     
 0.587
Your Current Organism:
Synergistes sp. 31syn1
NCBI taxonomy Id: 457415
Other names: S. sp. 3_1_syn1, Synergistes sp. 3_1_syn1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.