Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHL63828.1 | EHL66004.1 | HMPREF1006_01087 | HMPREF1006_02936 | Hypothetical protein. | Hypothetical protein. | 0.636 |
EHL65687.1 | EHL66002.1 | HMPREF1006_00161 | HMPREF1006_02934 | Hypothetical protein; Involved in cell division and chromosome segregation. | Pur operon repressor PurR. | 0.479 |
EHL65687.1 | EHL66004.1 | HMPREF1006_00161 | HMPREF1006_02936 | Hypothetical protein; Involved in cell division and chromosome segregation. | Hypothetical protein. | 0.432 |
EHL65687.1 | EHL69282.1 | HMPREF1006_00161 | HMPREF1006_02009 | Hypothetical protein; Involved in cell division and chromosome segregation. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.454 |
EHL65687.1 | codY | HMPREF1006_00161 | HMPREF1006_00400 | Hypothetical protein; Involved in cell division and chromosome segregation. | GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.458 |
EHL66002.1 | EHL65687.1 | HMPREF1006_02934 | HMPREF1006_00161 | Pur operon repressor PurR. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.479 |
EHL66002.1 | EHL66004.1 | HMPREF1006_02934 | HMPREF1006_02936 | Pur operon repressor PurR. | Hypothetical protein. | 0.886 |
EHL66002.1 | EHL66005.1 | HMPREF1006_02934 | HMPREF1006_02937 | Pur operon repressor PurR. | Selenocysteine-specific translation elongation factor. | 0.482 |
EHL66002.1 | EHL66708.1 | HMPREF1006_02934 | HMPREF1006_01456 | Pur operon repressor PurR. | Hypothetical protein. | 0.455 |
EHL66002.1 | EHL66709.1 | HMPREF1006_02934 | HMPREF1006_01457 | Pur operon repressor PurR. | Hypothetical protein. | 0.445 |
EHL66002.1 | codY | HMPREF1006_02934 | HMPREF1006_00400 | Pur operon repressor PurR. | GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.546 |
EHL66002.1 | ispE | HMPREF1006_02934 | HMPREF1006_02935 | Pur operon repressor PurR. | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.832 |
EHL66002.1 | selA | HMPREF1006_02934 | HMPREF1006_02938 | Pur operon repressor PurR. | L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. | 0.506 |
EHL66004.1 | EHL63828.1 | HMPREF1006_02936 | HMPREF1006_01087 | Hypothetical protein. | Hypothetical protein. | 0.636 |
EHL66004.1 | EHL65687.1 | HMPREF1006_02936 | HMPREF1006_00161 | Hypothetical protein. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.432 |
EHL66004.1 | EHL66002.1 | HMPREF1006_02936 | HMPREF1006_02934 | Hypothetical protein. | Pur operon repressor PurR. | 0.886 |
EHL66004.1 | EHL66005.1 | HMPREF1006_02936 | HMPREF1006_02937 | Hypothetical protein. | Selenocysteine-specific translation elongation factor. | 0.587 |
EHL66004.1 | EHL66708.1 | HMPREF1006_02936 | HMPREF1006_01456 | Hypothetical protein. | Hypothetical protein. | 0.440 |
EHL66004.1 | EHL66709.1 | HMPREF1006_02936 | HMPREF1006_01457 | Hypothetical protein. | Hypothetical protein. | 0.424 |
EHL66004.1 | EHL69282.1 | HMPREF1006_02936 | HMPREF1006_02009 | Hypothetical protein. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.468 |
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