Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBFG_00295Asp/Glu/Hydantoin racemase. (239 aa)    
Predicted Functional Partners:
CBFG_00293
MmgE/PrpD family protein.
 
     0.859
CBFG_00291
MmgE/PrpD family protein.
 
     0.822
CBFG_00294
Conserved hypothetical protein TIGR03982.
 
    
0.752
CBFG_00292
Hypothetical protein.
       0.698
CBFG_02561
FAD binding domain protein.
  
  
  0.680
CBFG_02215
Hypothetical protein.
  
  
  0.664
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.651
CBFG_04046
L-asparaginase, type I.
     
  0.651
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
  0.651
CBFG_00528
N-carbamoylsarcosine amidase.
 
  
 0.639
Your Current Organism:
Clostridiales bacterium 1747FAA
NCBI taxonomy Id: 457421
Other names: C. bacterium 1_7_47FAA, Clostridiales bacterium 1_7_47FAA
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